Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trdmt1O55055 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.18■□□□□ 0.18
Trdmt1O55055 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trdmt1O55055 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trdmt1O55055 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trdmt1O55055 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.17■□□□□ 0.18
Trdmt1O55055 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.17■□□□□ 0.18
Trdmt1O55055 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.17■□□□□ 0.18
Trdmt1O55055 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.17■□□□□ 0.18
Trdmt1O55055 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.17■□□□□ 0.18
Trdmt1O55055 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trdmt1O55055 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.17■□□□□ 0.18
Trdmt1O55055 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trdmt1O55055 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdmt1O55055 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trdmt1O55055 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.16■□□□□ 0.18
Trdmt1O55055 Gm45668-201ENSMUST00000211271 493 ntBASIC16.16■□□□□ 0.18
Trdmt1O55055 Gm9797-201ENSMUST00000052902 613 ntBASIC16.16■□□□□ 0.18
Trdmt1O55055 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trdmt1O55055 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trdmt1O55055 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trdmt1O55055 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trdmt1O55055 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdmt1O55055 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Trdmt1O55055 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 BC001981-202ENSMUST00000191393 1545 ntBASIC16.15■□□□□ 0.18
Trdmt1O55055 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trdmt1O55055 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Trdmt1O55055 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Gm12138-201ENSMUST00000122180 951 ntBASIC16.15■□□□□ 0.18
Trdmt1O55055 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.15■□□□□ 0.18
Trdmt1O55055 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.15■□□□□ 0.18
Trdmt1O55055 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.15■□□□□ 0.18
Trdmt1O55055 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Gm10766-202ENSMUST00000194123 606 ntBASIC16.15■□□□□ 0.18
Trdmt1O55055 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.15■□□□□ 0.18
Trdmt1O55055 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms