Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.19■□□□□ 0.18
Sptlc1O35704 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Sptlc1O35704 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sptlc1O35704 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Sptlc1O35704 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sptlc1O35704 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.19■□□□□ 0.18
Sptlc1O35704 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sptlc1O35704 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.19■□□□□ 0.18
Sptlc1O35704 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sptlc1O35704 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Gm2423-201ENSMUST00000074863 733 ntBASIC16.19■□□□□ 0.18
Sptlc1O35704 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.19■□□□□ 0.18
Sptlc1O35704 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.18■□□□□ 0.18
Sptlc1O35704 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.18■□□□□ 0.18
Sptlc1O35704 Gm14767-201ENSMUST00000121559 586 ntBASIC16.18■□□□□ 0.18
Sptlc1O35704 Gm23547-201ENSMUST00000158210 271 ntBASIC16.18■□□□□ 0.18
Sptlc1O35704 Gm5866-201ENSMUST00000177881 973 ntBASIC16.18■□□□□ 0.18
Sptlc1O35704 Gm27680-201ENSMUST00000184192 160 ntBASIC16.18■□□□□ 0.18
Sptlc1O35704 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.18■□□□□ 0.18
Sptlc1O35704 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Sptlc1O35704 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sptlc1O35704 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptlc1O35704 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC16.17■□□□□ 0.18
Sptlc1O35704 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.17■□□□□ 0.18
Sptlc1O35704 Gm15487-201ENSMUST00000122373 465 ntBASIC16.17■□□□□ 0.18
Sptlc1O35704 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC16.17■□□□□ 0.18
Sptlc1O35704 Gm7775-201ENSMUST00000218871 853 ntBASIC16.17■□□□□ 0.18
Sptlc1O35704 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 CT010431.1-201ENSMUST00000221249 1080 ntBASIC16.17■□□□□ 0.18
Sptlc1O35704 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sptlc1O35704 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.17■□□□□ 0.18
Sptlc1O35704 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.17■□□□□ 0.18
Sptlc1O35704 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.17■□□□□ 0.18
Sptlc1O35704 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Sptlc1O35704 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptlc1O35704 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptlc1O35704 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sptlc1O35704 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sptlc1O35704 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptlc1O35704 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptlc1O35704 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptlc1O35704 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptlc1O35704 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms