Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh11xF6ZNL5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh11xF6ZNL5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh11xF6ZNL5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh11xF6ZNL5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Gm27301-201ENSMUST00000184012 127 ntBASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh11xF6ZNL5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh11xF6ZNL5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Gm17271-201ENSMUST00000165535 355 ntBASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh11xF6ZNL5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms