Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Gm2451-201ENSMUST00000199447 999 ntBASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Gm10290-201ENSMUST00000200451 999 ntBASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Gm45612-201ENSMUST00000211320 160 ntBASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cpsf4lE9Q2N0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4lE9Q2N0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Gm6973-201ENSMUST00000117080 721 ntBASIC12.47□□□□□ -0.41
Cpsf4lE9Q2N0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms