Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Snora78-201ENSMUST00000158630 128 ntBASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Gm16476-201ENSMUST00000221544 139 ntBASIC12.87□□□□□ -0.35
Dchs1E9PVD3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dchs1E9PVD3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Gm15236-201ENSMUST00000117309 379 ntBASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Olfr582-201ENSMUST00000098212 960 ntBASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Gm9229-201ENSMUST00000222777 126 ntBASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dchs1E9PVD3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Mir6392-201ENSMUST00000184924 108 ntBASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Gm46209-201ENSMUST00000217912 553 ntBASIC12.85□□□□□ -0.35
Dchs1E9PVD3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dchs1E9PVD3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.84□□□□□ -0.35
Dchs1E9PVD3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Dchs1E9PVD3 Gm23931-201ENSMUST00000103842 109 ntBASIC12.84□□□□□ -0.35
Dchs1E9PVD3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms