Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Gm27622-201ENSMUST00000183779 60 ntBASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap99A0A140LIX9 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Gm10499-201ENSMUST00000174094 934 ntBASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Cfap99A0A140LIX9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cfap99A0A140LIX9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cfap99A0A140LIX9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms