Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm29518-201ENSMUST00000190858 372 ntBASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm7506-201ENSMUST00000207758 815 ntBASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-5A0A075B6B9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms