Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm27646-201ENSMUST00000183989 110 ntBASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms