Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-1A0A075B5Z8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm12644-201ENSMUST00000119935 606 ntBASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm11780-201ENSMUST00000136880 516 ntBASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Trav6-1A0A075B5Z8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms