Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Gm13616-201ENSMUST00000120600 222 ntBASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Otud1Q9CUB6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Gm25948-201ENSMUST00000175334 112 ntBASIC13.97□□□□□ -0.17
Otud1Q9CUB6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Otud1Q9CUB6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Efs-202ENSMUST00000227037 2540 ntBASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.96□□□□□ -0.17
Otud1Q9CUB6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Gm11543-201ENSMUST00000120758 370 ntBASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Otud1Q9CUB6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.96□□□□□ -0.18
Otud1Q9CUB6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Otud1Q9CUB6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Otud1Q9CUB6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Otud1Q9CUB6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.18
Otud1Q9CUB6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Otud1Q9CUB6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Otud1Q9CUB6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms