Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Gm6736-201ENSMUST00000166583 948 ntBASIC13.3□□□□□ -0.28
Raf1Q99N57 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Gm27702-201ENSMUST00000184512 56 ntBASIC13.3□□□□□ -0.28
Raf1Q99N57 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Raf1Q99N57 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.3□□□□□ -0.28
Raf1Q99N57 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Raf1Q99N57 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Raf1Q99N57 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.3□□□□□ -0.28
Raf1Q99N57 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Raf1Q99N57 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raf1Q99N57 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.29□□□□□ -0.28
Raf1Q99N57 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Gm8344-201ENSMUST00000119813 856 ntBASIC13.29□□□□□ -0.28
Raf1Q99N57 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.29□□□□□ -0.28
Raf1Q99N57 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raf1Q99N57 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Raf1Q99N57 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Gm15467-201ENSMUST00000120582 445 ntBASIC13.28□□□□□ -0.28
Raf1Q99N57 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.28□□□□□ -0.28
Raf1Q99N57 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.28□□□□□ -0.28
Raf1Q99N57 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.28□□□□□ -0.28
Raf1Q99N57 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.28□□□□□ -0.28
Raf1Q99N57 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.28□□□□□ -0.28
Raf1Q99N57 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Raf1Q99N57 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Raf1Q99N57 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms