Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm12585-201ENSMUST00000117307 290 ntBASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Gm15678-201ENSMUST00000117573 960 ntBASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Gm12341-201ENSMUST00000119724 503 ntBASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Mir1894-201ENSMUST00000122802 81 ntBASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Gm37424-201ENSMUST00000191727 561 ntBASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.7■□□□□ 0.1
Lmcd1Q8VEE1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Gm8062-201ENSMUST00000139696 444 ntBASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Mir7654-201ENSMUST00000185082 70 ntBASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Gm45784-201ENSMUST00000188360 142 ntBASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Prob1-201ENSMUST00000097619 3021 ntBASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lmcd1Q8VEE1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Gm6244-201ENSMUST00000178732 841 ntBASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lmcd1Q8VEE1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.67■□□□□ 0.1
Lmcd1Q8VEE1 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms