Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Gm15372-201ENSMUST00000120729 834 ntBASIC9.32□□□□□ -0.92
Cystm1Q8K353 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Cystm1Q8K353 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.31□□□□□ -0.92
Cystm1Q8K353 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC9.31□□□□□ -0.92
Cystm1Q8K353 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms