Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf3Q8C120 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf3Q8C120 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Gm16198-201ENSMUST00000118766 670 ntBASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Gm5177-201ENSMUST00000183092 997 ntBASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Gm18206-201ENSMUST00000207027 926 ntBASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sh3rf3Q8C120 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf3Q8C120 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms