Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Acot6-202ENSMUST00000222921 3622 ntBASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Gm15794-201ENSMUST00000120182 631 ntBASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx4Q7TNK1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx4Q7TNK1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx4Q7TNK1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Rfx4Q7TNK1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx4Q7TNK1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx4Q7TNK1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx4Q7TNK1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx4Q7TNK1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Mir3081-201ENSMUST00000175305 84 ntBASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Gm6345-202ENSMUST00000180900 204 ntBASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx4Q7TNK1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms