Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.42□□□□□ -0.42
Rif1Q6PR54 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm13813-201ENSMUST00000120998 787 ntBASIC12.41□□□□□ -0.42
Rif1Q6PR54 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm24196-201ENSMUST00000179161 110 ntBASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm8099-201ENSMUST00000200510 742 ntBASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.41□□□□□ -0.42
Rif1Q6PR54 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm11814-201ENSMUST00000119515 929 ntBASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm18307-201ENSMUST00000206864 949 ntBASIC12.41□□□□□ -0.42
Rif1Q6PR54 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rif1Q6PR54 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm6257-201ENSMUST00000163864 910 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm16505-201ENSMUST00000179981 232 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm19184-201ENSMUST00000196798 928 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm7287-201ENSMUST00000205267 602 ntBASIC12.4□□□□□ -0.42
Rif1Q6PR54 Gm40466-201ENSMUST00000212174 422 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms