Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hdac4Q6NZM9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Olfr286-202ENSMUST00000205305 969 ntBASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hdac4Q6NZM9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hdac4Q6NZM9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms