Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.69■□□□□ 0.58
Clcn1Q64347 Gm15321-201ENSMUST00000121290 288 ntBASIC18.69■□□□□ 0.58
Clcn1Q64347 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.69■□□□□ 0.58
Clcn1Q64347 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.69■□□□□ 0.58
Clcn1Q64347 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.69■□□□□ 0.58
Clcn1Q64347 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.69■□□□□ 0.58
Clcn1Q64347 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn1Q64347 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clcn1Q64347 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clcn1Q64347 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clcn1Q64347 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Clcn1Q64347 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Clcn1Q64347 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Gm43767-201ENSMUST00000198933 381 ntBASIC18.68■□□□□ 0.58
Clcn1Q64347 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.68■□□□□ 0.58
Clcn1Q64347 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn1Q64347 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Clcn1Q64347 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Clcn1Q64347 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Clcn1Q64347 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.67■□□□□ 0.58
Clcn1Q64347 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Clcn1Q64347 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.67■□□□□ 0.58
Clcn1Q64347 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clcn1Q64347 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn1Q64347 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Clcn1Q64347 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Gm14928-201ENSMUST00000120198 477 ntBASIC18.66■□□□□ 0.58
Clcn1Q64347 Mir1897-201ENSMUST00000122581 272 ntBASIC18.66■□□□□ 0.58
Clcn1Q64347 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.66■□□□□ 0.58
Clcn1Q64347 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Clcn1Q64347 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Clcn1Q64347 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn1Q64347 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Clcn1Q64347 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms