Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Gm27300-201ENSMUST00000184085 97 ntBASIC13.18□□□□□ -0.3
Traf4Q61382 Gm27335-201ENSMUST00000184758 97 ntBASIC13.18□□□□□ -0.3
Traf4Q61382 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.18□□□□□ -0.3
Traf4Q61382 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Traf4Q61382 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Traf4Q61382 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Traf4Q61382 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.18□□□□□ -0.3
Traf4Q61382 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.18□□□□□ -0.3
Traf4Q61382 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Traf4Q61382 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.18□□□□□ -0.3
Traf4Q61382 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Traf4Q61382 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Traf4Q61382 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.17□□□□□ -0.3
Traf4Q61382 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.17□□□□□ -0.3
Traf4Q61382 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.17□□□□□ -0.3
Traf4Q61382 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.17□□□□□ -0.3
Traf4Q61382 Gm18489-201ENSMUST00000172565 551 ntBASIC13.17□□□□□ -0.3
Traf4Q61382 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.17□□□□□ -0.3
Traf4Q61382 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.17□□□□□ -0.3
Traf4Q61382 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Traf4Q61382 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Traf4Q61382 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Traf4Q61382 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.16□□□□□ -0.3
Traf4Q61382 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Gm12134-201ENSMUST00000122109 520 ntBASIC13.16□□□□□ -0.3
Traf4Q61382 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.16□□□□□ -0.3
Traf4Q61382 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.16□□□□□ -0.3
Traf4Q61382 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Traf4Q61382 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Gm9682-201ENSMUST00000197505 556 ntBASIC13.16□□□□□ -0.3
Traf4Q61382 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.16□□□□□ -0.3
Traf4Q61382 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Traf4Q61382 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Traf4Q61382 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Traf4Q61382 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms