Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm18489-201ENSMUST00000172565 551 ntBASIC13.37□□□□□ -0.27
Rfx3P48381 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.37□□□□□ -0.27
Rfx3P48381 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfx3P48381 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.37□□□□□ -0.27
Rfx3P48381 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.37□□□□□ -0.27
Rfx3P48381 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx3P48381 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfx3P48381 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.36□□□□□ -0.27
Rfx3P48381 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.36□□□□□ -0.27
Rfx3P48381 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rfx3P48381 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.36□□□□□ -0.27
Rfx3P48381 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.36□□□□□ -0.27
Rfx3P48381 Gm23547-201ENSMUST00000158210 271 ntBASIC13.36□□□□□ -0.27
Rfx3P48381 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.36□□□□□ -0.27
Rfx3P48381 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rfx3P48381 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rfx3P48381 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rfx3P48381 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx3P48381 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfx3P48381 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfx3P48381 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfx3P48381 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfx3P48381 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfx3P48381 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfx3P48381 Gm10499-201ENSMUST00000174094 934 ntBASIC13.35□□□□□ -0.27
Rfx3P48381 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.35□□□□□ -0.27
Rfx3P48381 Gm37153-201ENSMUST00000193637 231 ntBASIC13.35□□□□□ -0.27
Rfx3P48381 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.35□□□□□ -0.27
Rfx3P48381 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfx3P48381 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfx3P48381 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfx3P48381 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx3P48381 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rfx3P48381 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms