Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rph3aP47708 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rph3aP47708 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.27□□□□□ -0.12
Rph3aP47708 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rph3aP47708 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rph3aP47708 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Rph3aP47708 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.27□□□□□ -0.13
Rph3aP47708 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.27□□□□□ -0.13
Rph3aP47708 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rph3aP47708 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rph3aP47708 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Rph3aP47708 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.27□□□□□ -0.13
Rph3aP47708 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rph3aP47708 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rph3aP47708 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.26□□□□□ -0.13
Rph3aP47708 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Rph3aP47708 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.26□□□□□ -0.13
Rph3aP47708 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.26□□□□□ -0.13
Rph3aP47708 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.26□□□□□ -0.13
Rph3aP47708 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rph3aP47708 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.26□□□□□ -0.13
Rph3aP47708 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rph3aP47708 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.25□□□□□ -0.13
Rph3aP47708 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Rph3aP47708 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.25□□□□□ -0.13
Rph3aP47708 AW822252-206ENSMUST00000208904 237 ntBASIC14.25□□□□□ -0.13
Rph3aP47708 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.25□□□□□ -0.13
Rph3aP47708 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.25□□□□□ -0.13
Rph3aP47708 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Rph3aP47708 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rph3aP47708 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rph3aP47708 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rph3aP47708 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.24□□□□□ -0.13
Rph3aP47708 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms