Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Mmp9P41245 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Mmp9P41245 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Mmp9P41245 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Mmp9P41245 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Mmp9P41245 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Mmp9P41245 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.43□□□□□ -0.42
Mmp9P41245 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.43□□□□□ -0.42
Mmp9P41245 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.43□□□□□ -0.42
Mmp9P41245 Gm28659-201ENSMUST00000188013 759 ntBASIC12.43□□□□□ -0.42
Mmp9P41245 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.43□□□□□ -0.42
Mmp9P41245 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Mmp9P41245 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Mmp9P41245 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Mmp9P41245 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.43□□□□□ -0.42
Mmp9P41245 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mmp9P41245 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.42□□□□□ -0.42
Mmp9P41245 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.42□□□□□ -0.42
Mmp9P41245 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Mmp9P41245 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Mmp9P41245 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Mmp9P41245 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mmp9P41245 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Mmp9P41245 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp9P41245 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.41□□□□□ -0.42
Mmp9P41245 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp9P41245 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp9P41245 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mmp9P41245 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp9P41245 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.41□□□□□ -0.42
Mmp9P41245 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mmp9P41245 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mmp9P41245 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mmp9P41245 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms