Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.68□□□□□ -0.22
Foxa1P35582 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Foxa1P35582 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.68□□□□□ -0.22
Foxa1P35582 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.68□□□□□ -0.22
Foxa1P35582 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.68□□□□□ -0.22
Foxa1P35582 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.68□□□□□ -0.22
Foxa1P35582 Gm25911-201ENSMUST00000157621 56 ntBASIC13.68□□□□□ -0.22
Foxa1P35582 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Foxa1P35582 Rpph1-201ENSMUST00000175096 319 ntBASIC13.68□□□□□ -0.22
Foxa1P35582 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Foxa1P35582 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.68□□□□□ -0.22
Foxa1P35582 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Foxa1P35582 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxa1P35582 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Foxa1P35582 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Foxa1P35582 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Foxa1P35582 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Foxa1P35582 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.67□□□□□ -0.22
Foxa1P35582 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.67□□□□□ -0.22
Foxa1P35582 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.67□□□□□ -0.22
Foxa1P35582 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
Foxa1P35582 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Foxa1P35582 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Foxa1P35582 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.66□□□□□ -0.22
Foxa1P35582 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms