Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pde6aP27664 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pde6aP27664 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pde6aP27664 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pde6aP27664 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.14■□□□□ 0.33
Pde6aP27664 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pde6aP27664 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.14■□□□□ 0.33
Pde6aP27664 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.14■□□□□ 0.33
Pde6aP27664 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.14■□□□□ 0.33
Pde6aP27664 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Rprl2-201ENSMUST00000157150 290 ntBASIC17.14■□□□□ 0.33
Pde6aP27664 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.14■□□□□ 0.33
Pde6aP27664 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pde6aP27664 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.14■□□□□ 0.33
Pde6aP27664 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pde6aP27664 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6aP27664 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.13■□□□□ 0.33
Pde6aP27664 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pde6aP27664 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.13■□□□□ 0.33
Pde6aP27664 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Gm23935-201ENSMUST00000102303 57 ntBASIC17.13■□□□□ 0.33
Pde6aP27664 Gm24270-201ENSMUST00000102326 57 ntBASIC17.13■□□□□ 0.33
Pde6aP27664 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.13■□□□□ 0.33
Pde6aP27664 Gm24245-201ENSMUST00000157318 57 ntBASIC17.13■□□□□ 0.33
Pde6aP27664 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pde6aP27664 Gm43575-201ENSMUST00000196420 516 ntBASIC17.13■□□□□ 0.33
Pde6aP27664 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.13■□□□□ 0.33
Pde6aP27664 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.13■□□□□ 0.33
Pde6aP27664 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pde6aP27664 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pde6aP27664 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pde6aP27664 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pde6aP27664 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6aP27664 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pde6aP27664 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.12■□□□□ 0.33
Pde6aP27664 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pde6aP27664 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.12■□□□□ 0.33
Pde6aP27664 Gm5479-201ENSMUST00000160578 435 ntBASIC17.12■□□□□ 0.33
Pde6aP27664 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.12■□□□□ 0.33
Pde6aP27664 Gm6736-201ENSMUST00000166583 948 ntBASIC17.12■□□□□ 0.33
Pde6aP27664 Gm18889-201ENSMUST00000174284 929 ntBASIC17.12■□□□□ 0.33
Pde6aP27664 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.12■□□□□ 0.33
Pde6aP27664 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pde6aP27664 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.12■□□□□ 0.33
Pde6aP27664 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pde6aP27664 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.12■□□□□ 0.33
Pde6aP27664 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.12■□□□□ 0.33
Pde6aP27664 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6aP27664 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6aP27664 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6aP27664 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pde6aP27664 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pde6aP27664 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pde6aP27664 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pde6aP27664 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pde6aP27664 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6aP27664 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pde6aP27664 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms