Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Rprl2-201ENSMUST00000157150 290 ntBASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Gm18889-201ENSMUST00000174284 929 ntBASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Gm18057-201ENSMUST00000208220 503 ntBASIC12.36□□□□□ -0.43
Ly6c1P0CW02 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ly6c1P0CW02 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms