Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
P06320 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC9.36□□□□□ -0.91
P06320 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
P06320 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC9.36□□□□□ -0.91
P06320 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC9.36□□□□□ -0.91
P06320 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC9.36□□□□□ -0.91
P06320 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
P06320 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
P06320 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
P06320 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
P06320 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
P06320 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P06320 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Gm38197-201ENSMUST00000192320 2122 ntBASIC9.35□□□□□ -0.91
P06320 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
P06320 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC9.35□□□□□ -0.91
P06320 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC9.35□□□□□ -0.91
P06320 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
P06320 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC9.35□□□□□ -0.91
P06320 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC9.35□□□□□ -0.91
P06320 Gm37722-201ENSMUST00000193757 208 ntBASIC9.35□□□□□ -0.91
P06320 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Gm30025-201ENSMUST00000218555 728 ntBASIC9.35□□□□□ -0.91
P06320 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC9.35□□□□□ -0.91
P06320 Nupl1-207ENSMUST00000225311 2475 ntBASIC9.35□□□□□ -0.91
P06320 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
P06320 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.35□□□□□ -0.91
P06320 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 AC153366.2-201ENSMUST00000219461 1984 ntBASIC9.35□□□□□ -0.91
P06320 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Gm43570-201ENSMUST00000199951 3688 ntBASIC9.35□□□□□ -0.91
P06320 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P06320 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P06320 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC9.34□□□□□ -0.91
P06320 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P06320 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC9.34□□□□□ -0.91
P06320 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P06320 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC9.34□□□□□ -0.91
P06320 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC9.34□□□□□ -0.91
P06320 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC9.34□□□□□ -0.91
P06320 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC9.34□□□□□ -0.91
P06320 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC9.34□□□□□ -0.91
P06320 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
P06320 AC159205.6-201ENSMUST00000224935 887 ntBASIC9.34□□□□□ -0.91
P06320 Arhgef33-211ENSMUST00000225658 473 ntBASIC9.34□□□□□ -0.91
P06320 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Gm9987-201ENSMUST00000069768 567 ntBASIC9.34□□□□□ -0.91
P06320 Gm5417-201ENSMUST00000079706 384 ntBASIC9.34□□□□□ -0.91
P06320 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC9.34□□□□□ -0.91
P06320 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P06320 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC9.34□□□□□ -0.91
P06320 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms