Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Gm5874-201ENSMUST00000096101 508 ntBASIC10.44□□□□□ -0.74
Hbb-b1P02088 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.44□□□□□ -0.74
Hbb-b1P02088 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-b1P02088 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.43□□□□□ -0.74
Hbb-b1P02088 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Gm13148-201ENSMUST00000118892 745 ntBASIC10.42□□□□□ -0.74
Hbb-b1P02088 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-b1P02088 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.42□□□□□ -0.74
Hbb-b1P02088 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-b1P02088 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms