Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.78□□□□□ -0.36
Igh-VJ558P01758 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igh-VJ558P01758 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Gm9385-201ENSMUST00000117563 472 ntBASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Gm9727-201ENSMUST00000161387 555 ntBASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igh-VJ558P01758 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.76□□□□□ -0.37
Igh-VJ558P01758 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Igh-VJ558P01758 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms