Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA3O60609 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA3O60609 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 KRT8P44-201ENST00000441609 1350 ntBASIC17.07■□□□□ 0.32
GFRA3O60609 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA3O60609 AP006294.1-201ENST00000415407 339 ntBASIC17.07■□□□□ 0.32
GFRA3O60609 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 AC140658.5-201ENST00000438532 169 ntBASIC17.07■□□□□ 0.32
GFRA3O60609 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 AC132938.2-201ENST00000579188 680 ntBASIC17.07■□□□□ 0.32
GFRA3O60609 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA3O60609 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
GFRA3O60609 ACTL9-202ENST00000612068 1252 ntBASIC17.07■□□□□ 0.32
GFRA3O60609 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
GFRA3O60609 GPR182-203ENST00000622922 591 ntBASIC17.07■□□□□ 0.32
GFRA3O60609 AL590560.3-201ENST00000623350 461 ntBASIC17.07■□□□□ 0.32
GFRA3O60609 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA3O60609 AL591163.1-201ENST00000641757 987 ntBASIC17.07■□□□□ 0.32
GFRA3O60609 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA3O60609 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GFRA3O60609 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.07■□□□□ 0.32
GFRA3O60609 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA3O60609 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA3O60609 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GFRA3O60609 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 AC097637.2-201ENST00000624096 1997 ntBASIC17.06■□□□□ 0.32
GFRA3O60609 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.06■□□□□ 0.32
GFRA3O60609 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.06■□□□□ 0.32
GFRA3O60609 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
GFRA3O60609 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA3O60609 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.06■□□□□ 0.32
GFRA3O60609 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
GFRA3O60609 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GFRA3O60609 AC073592.8-201ENST00000624126 511 ntBASIC17.06■□□□□ 0.32
GFRA3O60609 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA3O60609 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA3O60609 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GFRA3O60609 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 AC007541.1-201ENST00000570282 1469 ntBASIC17.05■□□□□ 0.32
GFRA3O60609 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
GFRA3O60609 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GFRA3O60609 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GFRA3O60609 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GFRA3O60609 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.05■□□□□ 0.32
GFRA3O60609 AC011495.1-201ENST00000498085 584 ntBASIC17.05■□□□□ 0.32
GFRA3O60609 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 MIR4538-201ENST00000581377 78 ntBASIC17.05■□□□□ 0.32
GFRA3O60609 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GFRA3O60609 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.05■□□□□ 0.32
GFRA3O60609 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.05■□□□□ 0.32
GFRA3O60609 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA3O60609 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms