Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.71□□□□□ -0.53
Efnb3O35393 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Efnb3O35393 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Efnb3O35393 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Efnb3O35393 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.71□□□□□ -0.53
Efnb3O35393 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Efnb3O35393 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Efnb3O35393 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.71□□□□□ -0.53
Efnb3O35393 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.71□□□□□ -0.53
Efnb3O35393 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Efnb3O35393 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.71□□□□□ -0.53
Efnb3O35393 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Efnb3O35393 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Efnb3O35393 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Efnb3O35393 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.71□□□□□ -0.54
Efnb3O35393 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Efnb3O35393 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Efnb3O35393 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Efnb3O35393 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Efnb3O35393 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.7□□□□□ -0.54
Efnb3O35393 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.7□□□□□ -0.54
Efnb3O35393 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Gm15372-201ENSMUST00000120729 834 ntBASIC11.7□□□□□ -0.54
Efnb3O35393 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.7□□□□□ -0.54
Efnb3O35393 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Efnb3O35393 Ank2-226ENSMUST00000189368 339 ntBASIC11.7□□□□□ -0.54
Efnb3O35393 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.7□□□□□ -0.54
Efnb3O35393 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Efnb3O35393 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.7□□□□□ -0.54
Efnb3O35393 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Efnb3O35393 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Efnb3O35393 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Efnb3O35393 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Efnb3O35393 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Efnb3O35393 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Efnb3O35393 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Efnb3O35393 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms