Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 AC174742.1-201ENSMUST00000218272 304 ntBASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Gm44492-201ENSMUST00000197012 141 ntBASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 AW822252-206ENSMUST00000208904 237 ntBASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-3J3QMG8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Gm13464-201ENSMUST00000119418 935 ntBASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-3J3QMG8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms