Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Cpsf4lE9Q2N0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4lE9Q2N0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4lE9Q2N0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4lE9Q2N0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4lE9Q2N0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.52□□□□□ -0.4
Cpsf4lE9Q2N0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4lE9Q2N0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Gm8749-201ENSMUST00000117737 331 ntBASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4lE9Q2N0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Gm15483-201ENSMUST00000120338 456 ntBASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4lE9Q2N0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Gm11025-201ENSMUST00000140773 466 ntBASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Gm9726-201ENSMUST00000180321 678 ntBASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4lE9Q2N0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms