Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp42B2RQC2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.27■□□□□ 0.36
Usp42B2RQC2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Usp42B2RQC2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Usp42B2RQC2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.27■□□□□ 0.36
Usp42B2RQC2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.27■□□□□ 0.36
Usp42B2RQC2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp42B2RQC2 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.27■□□□□ 0.36
Usp42B2RQC2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Usp42B2RQC2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp42B2RQC2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Usp42B2RQC2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp42B2RQC2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Rprl2-201ENSMUST00000157150 290 ntBASIC17.26■□□□□ 0.35
Usp42B2RQC2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Gm37935-201ENSMUST00000192012 982 ntBASIC17.26■□□□□ 0.35
Usp42B2RQC2 Gm2756-201ENSMUST00000195851 400 ntBASIC17.26■□□□□ 0.35
Usp42B2RQC2 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.26■□□□□ 0.35
Usp42B2RQC2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Gm45098-201ENSMUST00000207179 657 ntBASIC17.26■□□□□ 0.35
Usp42B2RQC2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.26■□□□□ 0.35
Usp42B2RQC2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp42B2RQC2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Gm11543-201ENSMUST00000120758 370 ntBASIC17.25■□□□□ 0.35
Usp42B2RQC2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Gm37230-201ENSMUST00000194491 818 ntBASIC17.25■□□□□ 0.35
Usp42B2RQC2 Gm2213-201ENSMUST00000197485 688 ntBASIC17.25■□□□□ 0.35
Usp42B2RQC2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.25■□□□□ 0.35
Usp42B2RQC2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp42B2RQC2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.24■□□□□ 0.35
Usp42B2RQC2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Usp42B2RQC2 Gm2810-201ENSMUST00000118681 990 ntBASIC17.24■□□□□ 0.35
Usp42B2RQC2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.24■□□□□ 0.35
Usp42B2RQC2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp42B2RQC2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms