Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.45□□□□□ -0.58
Trav16A0A075B653 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.45□□□□□ -0.58
Trav16A0A075B653 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.45□□□□□ -0.58
Trav16A0A075B653 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Gm45328-201ENSMUST00000210942 917 ntBASIC11.45□□□□□ -0.58
Trav16A0A075B653 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.45□□□□□ -0.58
Trav16A0A075B653 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16A0A075B653 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.44□□□□□ -0.58
Trav16A0A075B653 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.44□□□□□ -0.58
Trav16A0A075B653 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Gm10013-201ENSMUST00000106074 672 ntBASIC11.44□□□□□ -0.58
Trav16A0A075B653 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav16A0A075B653 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16A0A075B653 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms