Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms