Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Gm13464-201ENSMUST00000119418 935 ntBASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Gm6745-201ENSMUST00000199216 526 ntBASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Gm9182-201ENSMUST00000217829 639 ntBASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8n-2A0A075B633 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Gm11478-201ENSMUST00000117851 599 ntBASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Gm27631-201ENSMUST00000184163 466 ntBASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav8n-2A0A075B633 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms