Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Carlr-201ENSMUST00000181515 2574 ntBASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Gm42535-201ENSMUST00000197312 1399 ntBASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retreg3Q9CQV4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gm25911-201ENSMUST00000157621 56 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gm27301-201ENSMUST00000184012 127 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gm2272-201ENSMUST00000194903 582 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gm17917-201ENSMUST00000218561 953 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 AC140209.1-201ENSMUST00000227875 284 ntBASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retreg3Q9CQV4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retreg3Q9CQV4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Retreg3Q9CQV4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retreg3Q9CQV4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retreg3Q9CQV4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retreg3Q9CQV4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Retreg3Q9CQV4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retreg3Q9CQV4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Gm37293-201ENSMUST00000191658 295 ntBASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Gm44872-201ENSMUST00000207864 420 ntBASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retreg3Q9CQV4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms