Protein–RNA interactions for Protein: Q99PV5

Bhlhe41, Class E basic helix-loop-helix protein 41, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe41Q99PV5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Bhlhe41Q99PV5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Bhlhe41Q99PV5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Bhlhe41Q99PV5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Bhlhe41Q99PV5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Bhlhe41Q99PV5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Bhlhe41Q99PV5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Bhlhe41Q99PV5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Bhlhe41Q99PV5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Bhlhe41Q99PV5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bhlhe41Q99PV5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.49□□□□□ -0.25
Bhlhe41Q99PV5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bhlhe41Q99PV5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Bhlhe41Q99PV5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bhlhe41Q99PV5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Bhlhe41Q99PV5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms