Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Gm27572-201ENSMUST00000183702 255 ntBASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Shd-206ENSMUST00000225145 998 ntBASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Gm7399-201ENSMUST00000032395 858 ntBASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col25a1Q99MQ5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Gm24543-201ENSMUST00000103867 82 ntBASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Gm10766-202ENSMUST00000194123 606 ntBASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col25a1Q99MQ5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Gm27839-201ENSMUST00000184242 106 ntBASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms