Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Gm43703-201ENSMUST00000200523 763 ntBASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Gm15823-201ENSMUST00000064305 670 ntBASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Gm9899-201ENSMUST00000065519 555 ntBASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-1Q99MA9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Gm9522-201ENSMUST00000182394 926 ntBASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Gm37917-201ENSMUST00000194711 392 ntBASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Gm45668-201ENSMUST00000211271 493 ntBASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-1Q99MA9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Mir1938-201ENSMUST00000158746 100 ntBASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms