Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Gm15358-201ENSMUST00000119249 520 ntBASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Gm15173-201ENSMUST00000122049 433 ntBASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Gm2651-201ENSMUST00000203560 838 ntBASIC14.31□□□□□ -0.12
Rnf8Q8VC56 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf8Q8VC56 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Gm6550-201ENSMUST00000187574 993 ntBASIC14.3□□□□□ -0.12
Rnf8Q8VC56 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf8Q8VC56 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Gm44771-201ENSMUST00000206975 626 ntBASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.29□□□□□ -0.12
Rnf8Q8VC56 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms