Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Gm10499-201ENSMUST00000174094 934 ntBASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Gm7506-201ENSMUST00000207758 815 ntBASIC12.11□□□□□ -0.47
Nup35Q8R4R6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup35Q8R4R6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Gm27867-201ENSMUST00000184778 125 ntBASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nup35Q8R4R6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nup35Q8R4R6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Nup35Q8R4R6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nup35Q8R4R6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nup35Q8R4R6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nup35Q8R4R6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Nup35Q8R4R6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms