Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Gm13464-201ENSMUST00000119418 935 ntBASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Gm11594-201ENSMUST00000122313 162 ntBASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rtn1Q8K0T0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Carlr-201ENSMUST00000181515 2574 ntBASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Rtn1Q8K0T0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Gm20553-201ENSMUST00000204205 844 ntBASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn1Q8K0T0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms