Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm10290-201ENSMUST00000200451 999 ntBASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Gm14859-201ENSMUST00000117752 357 ntBASIC16.19■□□□□ 0.18
Sox30Q8CGW4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox30Q8CGW4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Mir7071-201ENSMUST00000184847 69 ntBASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox30Q8CGW4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Gm7230-201ENSMUST00000173026 815 ntBASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Gm4899-201ENSMUST00000178708 719 ntBASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms