Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm11478-201ENSMUST00000117851 599 ntBASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Gm24694-201ENSMUST00000180054 110 ntBASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Gm27663-201ENSMUST00000184839 110 ntBASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Gm45384-201ENSMUST00000210451 277 ntBASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ptcd1Q8C2E4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ptcd1Q8C2E4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptcd1Q8C2E4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptcd1Q8C2E4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Gm29667-201ENSMUST00000190817 490 ntBASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Gm8515-201ENSMUST00000194852 576 ntBASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Gm6180-201ENSMUST00000065243 498 ntBASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptcd1Q8C2E4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Ptcd1Q8C2E4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms