Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Grk6-207ENSMUST00000225925 2769 ntBASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Gm15358-201ENSMUST00000119249 520 ntBASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ckap4Q8BMK4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Gm6376-201ENSMUST00000209407 580 ntBASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ckap4Q8BMK4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Mir8098-201ENSMUST00000184011 137 ntBASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ckap4Q8BMK4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms