Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Gm21362-201ENSMUST00000194272 928 ntBASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf18Q8BM39 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Gm23547-201ENSMUST00000158210 271 ntBASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.12□□□□□ -0.15
Prpf18Q8BM39 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf18Q8BM39 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms