Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrtm4Q80XG9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Gm8396-201ENSMUST00000057361 823 ntBASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrtm4Q80XG9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Gm27920-201ENSMUST00000183953 96 ntBASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Gm43474-201ENSMUST00000196415 774 ntBASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lrrtm4Q80XG9 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lrrtm4Q80XG9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms