Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf139Q7TMV1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf139Q7TMV1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf139Q7TMV1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf139Q7TMV1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Gm15483-201ENSMUST00000120338 456 ntBASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf139Q7TMV1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Gm2451-201ENSMUST00000199447 999 ntBASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Gm10290-201ENSMUST00000200451 999 ntBASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf139Q7TMV1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Gm9726-201ENSMUST00000180321 678 ntBASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf139Q7TMV1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms