Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Scn9aQ62205 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.18■□□□□ 0.34
Scn9aQ62205 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn9aQ62205 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn9aQ62205 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scn9aQ62205 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn9aQ62205 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Scn9aQ62205 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Gm23931-201ENSMUST00000103842 109 ntBASIC17.17■□□□□ 0.34
Scn9aQ62205 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn9aQ62205 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn9aQ62205 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.16■□□□□ 0.34
Scn9aQ62205 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scn9aQ62205 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.16■□□□□ 0.34
Scn9aQ62205 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Gm9182-201ENSMUST00000217829 639 ntBASIC17.16■□□□□ 0.34
Scn9aQ62205 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn9aQ62205 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Scn9aQ62205 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.15■□□□□ 0.34
Scn9aQ62205 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Scn9aQ62205 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.15■□□□□ 0.34
Scn9aQ62205 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.15■□□□□ 0.34
Scn9aQ62205 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
Scn9aQ62205 Gm27731-201ENSMUST00000185192 107 ntBASIC17.15■□□□□ 0.34
Scn9aQ62205 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Gm17794-201ENSMUST00000220252 955 ntBASIC17.15■□□□□ 0.34
Scn9aQ62205 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn9aQ62205 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn9aQ62205 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Scn9aQ62205 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn9aQ62205 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scn9aQ62205 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.14■□□□□ 0.33
Scn9aQ62205 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scn9aQ62205 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.14■□□□□ 0.33
Scn9aQ62205 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn9aQ62205 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.14■□□□□ 0.33
Scn9aQ62205 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.14■□□□□ 0.33
Scn9aQ62205 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms